Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL161645.1-201ENST00000622716 1255 ntBASIC17.65■□□□□ 0.42
HMGA1P17096 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HMGA1P17096 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGA1P17096 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGA1P17096 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGA1P17096 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HMGA1P17096 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGA1P17096 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGA1P17096 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGA1P17096 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGA1P17096 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HMGA1P17096 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGA1P17096 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGA1P17096 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.64■□□□□ 0.42
HMGA1P17096 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
HMGA1P17096 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGA1P17096 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HMGA1P17096 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGA1P17096 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
HMGA1P17096 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGA1P17096 AC131009.4-201ENST00000624048 1740 ntBASIC17.64■□□□□ 0.41
HMGA1P17096 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGA1P17096 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGA1P17096 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HMGA1P17096 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGA1P17096 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.64■□□□□ 0.41
HMGA1P17096 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGA1P17096 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGA1P17096 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.64■□□□□ 0.41
HMGA1P17096 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGA1P17096 AC087641.1-201ENST00000557561 1021 ntBASIC17.64■□□□□ 0.41
HMGA1P17096 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGA1P17096 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.64■□□□□ 0.41
HMGA1P17096 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.64■□□□□ 0.41
HMGA1P17096 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 AC009093.7-201ENST00000623853 1223 ntBASIC17.64■□□□□ 0.41
HMGA1P17096 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HMGA1P17096 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HMGA1P17096 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
HMGA1P17096 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGA1P17096 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGA1P17096 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGA1P17096 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HMGA1P17096 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HMGA1P17096 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGA1P17096 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 AL592309.1-201ENST00000443127 649 ntBASIC17.63■□□□□ 0.41
HMGA1P17096 RN7SL589P-201ENST00000481268 310 ntBASIC17.63■□□□□ 0.41
HMGA1P17096 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.63■□□□□ 0.41
HMGA1P17096 MIR4492-201ENST00000581627 80 ntBASIC17.63■□□□□ 0.41
HMGA1P17096 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.63■□□□□ 0.41
HMGA1P17096 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HMGA1P17096 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HMGA1P17096 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGA1P17096 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA1P17096 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA1P17096 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA1P17096 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HMGA1P17096 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGA1P17096 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA1P17096 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA1P17096 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA1P17096 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGA1P17096 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGA1P17096 FAM58DP-201ENST00000428076 619 ntBASIC17.62■□□□□ 0.41
HMGA1P17096 SPCS2P4-201ENST00000436160 681 ntBASIC17.62■□□□□ 0.41
HMGA1P17096 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HMGA1P17096 AC069335.1-201ENST00000489972 472 ntBASIC17.62■□□□□ 0.41
HMGA1P17096 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGA1P17096 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HMGA1P17096 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HMGA1P17096 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
HMGA1P17096 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.62■□□□□ 0.41
HMGA1P17096 LINC01225-203ENST00000563550 1244 ntBASIC17.62■□□□□ 0.41
HMGA1P17096 AL031055.1-201ENST00000606362 631 ntBASIC17.62■□□□□ 0.41
HMGA1P17096 AC106028.4-201ENST00000614509 607 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms