Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL3L1P16619 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL3L1P16619 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 GPR89P-201ENST00000407924 1495 ntBASIC14.15□□□□□ -0.14
CCL3L1P16619 RPS2P28-201ENST00000314255 741 ntBASIC14.15□□□□□ -0.14
CCL3L1P16619 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL3L1P16619 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL3L1P16619 AC079776.4-201ENST00000511039 504 ntBASIC14.15□□□□□ -0.14
CCL3L1P16619 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 AL662844.1-201ENST00000546340 181 ntBASIC14.15□□□□□ -0.14
CCL3L1P16619 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.15□□□□□ -0.14
CCL3L1P16619 AP001005.1-201ENST00000571755 1248 ntBASIC14.15□□□□□ -0.14
CCL3L1P16619 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
CCL3L1P16619 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 AC060834.1-201ENST00000443027 2032 ntBASIC14.15□□□□□ -0.14
CCL3L1P16619 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL3L1P16619 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL3L1P16619 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL3L1P16619 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL3L1P16619 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL3L1P16619 AC026396.1-201ENST00000419388 421 ntBASIC14.14□□□□□ -0.15
CCL3L1P16619 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL3L1P16619 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL3L1P16619 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 AC092910.1-201ENST00000482027 1129 ntBASIC14.14□□□□□ -0.15
CCL3L1P16619 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL3L1P16619 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.14□□□□□ -0.15
CCL3L1P16619 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 AC105339.3-201ENST00000560043 636 ntBASIC14.14□□□□□ -0.15
CCL3L1P16619 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL3L1P16619 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL3L1P16619 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.14□□□□□ -0.15
CCL3L1P16619 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL3L1P16619 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL3L1P16619 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL3L1P16619 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL3L1P16619 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL3L1P16619 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL3L1P16619 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL3L1P16619 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL3L1P16619 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms