Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.82■□□□□ 0.6
ITGA4P13612 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ITGA4P13612 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.82■□□□□ 0.6
ITGA4P13612 UPF3AP3-201ENST00000420996 769 ntBASIC18.82■□□□□ 0.6
ITGA4P13612 ACTG1P4-201ENST00000425123 1122 ntBASIC18.82■□□□□ 0.6
ITGA4P13612 AC002347.1-201ENST00000569543 541 ntBASIC18.82■□□□□ 0.6
ITGA4P13612 AC010327.4-202ENST00000591484 748 ntBASIC18.82■□□□□ 0.6
ITGA4P13612 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.82■□□□□ 0.6
ITGA4P13612 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.82■□□□□ 0.6
ITGA4P13612 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.82■□□□□ 0.6
ITGA4P13612 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ITGA4P13612 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA4P13612 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ITGA4P13612 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA4P13612 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.82■□□□□ 0.6
ITGA4P13612 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.82■□□□□ 0.6
ITGA4P13612 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
ITGA4P13612 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA4P13612 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ITGA4P13612 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA4P13612 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA4P13612 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ITGA4P13612 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.81■□□□□ 0.6
ITGA4P13612 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 AP002414.1-201ENST00000391405 1147 ntBASIC18.81■□□□□ 0.6
ITGA4P13612 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 PRSS29P-201ENST00000440800 595 ntBASIC18.81■□□□□ 0.6
ITGA4P13612 DNAJB3-201ENST00000446806 729 ntBASIC18.81■□□□□ 0.6
ITGA4P13612 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 MIR3687-2-201ENST00000577708 61 ntBASIC18.81■□□□□ 0.6
ITGA4P13612 AL139327.4-201ENST00000612362 153 ntBASIC18.81■□□□□ 0.6
ITGA4P13612 MIR3687-1-201ENST00000614492 61 ntBASIC18.81■□□□□ 0.6
ITGA4P13612 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.81■□□□□ 0.6
ITGA4P13612 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA4P13612 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ITGA4P13612 CROCCP2-202ENST00000412962 2773 ntBASIC18.81■□□□□ 0.6
ITGA4P13612 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA4P13612 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ITGA4P13612 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.8■□□□□ 0.6
ITGA4P13612 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 MRPL20P1-201ENST00000400819 433 ntBASIC18.8■□□□□ 0.6
ITGA4P13612 AC004832.2-201ENST00000426397 482 ntBASIC18.8■□□□□ 0.6
ITGA4P13612 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 GGTLC5P-201ENST00000617623 998 ntBASIC18.8■□□□□ 0.6
ITGA4P13612 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.8■□□□□ 0.6
ITGA4P13612 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ITGA4P13612 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ITGA4P13612 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.8■□□□□ 0.6
ITGA4P13612 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA4P13612 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 NKILA-202ENST00000614771 2598 ntBASIC18.8■□□□□ 0.6
ITGA4P13612 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA4P13612 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA4P13612 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA4P13612 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ITGA4P13612 AL135999.2-201ENST00000622438 1686 ntBASIC18.79■□□□□ 0.6
ITGA4P13612 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA4P13612 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ITGA4P13612 AC011676.5-201ENST00000624864 2660 ntBASIC18.79■□□□□ 0.6
ITGA4P13612 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ITGA4P13612 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA4P13612 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA4P13612 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms