Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.12■□□□□ 0.81
TOP1P11387 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.12■□□□□ 0.81
TOP1P11387 VN2R19P-201ENST00000442399 1052 ntBASIC20.12■□□□□ 0.81
TOP1P11387 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.12■□□□□ 0.81
TOP1P11387 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.12■□□□□ 0.81
TOP1P11387 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.12■□□□□ 0.81
TOP1P11387 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.12■□□□□ 0.81
TOP1P11387 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.12■□□□□ 0.81
TOP1P11387 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.12■□□□□ 0.81
TOP1P11387 MIR4751-201ENST00000578027 74 ntBASIC20.12■□□□□ 0.81
TOP1P11387 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.12■□□□□ 0.81
TOP1P11387 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.12■□□□□ 0.81
TOP1P11387 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TOP1P11387 AC099398.1-201ENST00000567919 2776 ntBASIC20.12■□□□□ 0.81
TOP1P11387 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TOP1P11387 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.12■□□□□ 0.81
TOP1P11387 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.12■□□□□ 0.81
TOP1P11387 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TOP1P11387 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.12■□□□□ 0.81
TOP1P11387 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TOP1P11387 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TOP1P11387 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TOP1P11387 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
TOP1P11387 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 AC080080.1-201ENST00000625121 2420 ntBASIC20.11■□□□□ 0.81
TOP1P11387 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TOP1P11387 CRYGEP-201ENST00000412192 528 ntBASIC20.11■□□□□ 0.81
TOP1P11387 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
TOP1P11387 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.11■□□□□ 0.81
TOP1P11387 PGAM5P1-201ENST00000518923 814 ntBASIC20.11■□□□□ 0.81
TOP1P11387 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.11■□□□□ 0.81
TOP1P11387 AC064836.3-201ENST00000607928 673 ntBASIC20.11■□□□□ 0.81
TOP1P11387 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.11■□□□□ 0.81
TOP1P11387 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.11■□□□□ 0.81
TOP1P11387 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.11■□□□□ 0.81
TOP1P11387 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.11■□□□□ 0.81
TOP1P11387 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TOP1P11387 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.11■□□□□ 0.81
TOP1P11387 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.11■□□□□ 0.81
TOP1P11387 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TOP1P11387 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.1■□□□□ 0.81
TOP1P11387 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.1■□□□□ 0.81
TOP1P11387 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 PP12613-201ENST00000424958 2230 ntBASIC20.1■□□□□ 0.81
TOP1P11387 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TOP1P11387 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TOP1P11387 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.1■□□□□ 0.81
TOP1P11387 PAWRP1-201ENST00000451083 565 ntBASIC20.1■□□□□ 0.81
TOP1P11387 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.1■□□□□ 0.81
TOP1P11387 RNA5SP416-201ENST00000516838 111 ntBASIC20.1■□□□□ 0.81
TOP1P11387 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TOP1P11387 AC010654.1-201ENST00000615722 808 ntBASIC20.1■□□□□ 0.81
TOP1P11387 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TOP1P11387 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TOP1P11387 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TOP1P11387 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.09■□□□□ 0.81
TOP1P11387 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.09■□□□□ 0.81
TOP1P11387 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.09■□□□□ 0.81
TOP1P11387 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.09■□□□□ 0.81
TOP1P11387 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 OR7E47P-204ENST00000575924 449 ntBASIC20.09■□□□□ 0.81
TOP1P11387 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
TOP1P11387 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.09■□□□□ 0.81
TOP1P11387 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.09■□□□□ 0.81
TOP1P11387 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TOP1P11387 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms