Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SPARCP09486 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SPARCP09486 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SPARCP09486 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 KLF4P1-201ENST00000412782 1185 ntBASIC15.3■□□□□ 0.04
SPARCP09486 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.3■□□□□ 0.04
SPARCP09486 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 KRT18P1-202ENST00000452408 1331 ntBASIC15.3■□□□□ 0.04
SPARCP09486 PCDHA14-201ENST00000506751 2298 ntBASIC15.3■□□□□ 0.04
SPARCP09486 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.3■□□□□ 0.04
SPARCP09486 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 AL353593.2-201ENST00000602529 1483 ntBASIC15.3■□□□□ 0.04
SPARCP09486 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.3■□□□□ 0.04
SPARCP09486 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.3■□□□□ 0.04
SPARCP09486 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPARCP09486 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.3■□□□□ 0.04
SPARCP09486 UBALD1-205ENST00000590891 2641 ntBASIC15.3■□□□□ 0.04
SPARCP09486 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SPARCP09486 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SPARCP09486 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.29■□□□□ 0.04
SPARCP09486 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPARCP09486 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 AC092068.3-201ENST00000587894 2016 ntBASIC15.29■□□□□ 0.04
SPARCP09486 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.29■□□□□ 0.04
SPARCP09486 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 AC079328.2-201ENST00000561241 3354 ntBASIC15.29■□□□□ 0.04
SPARCP09486 AL135999.2-201ENST00000622438 1686 ntBASIC15.29■□□□□ 0.04
SPARCP09486 EGFEM1P-202ENST00000431685 1563 ntBASIC15.29■□□□□ 0.04
SPARCP09486 AC009336.1-201ENST00000608941 1553 ntBASIC15.29■□□□□ 0.04
SPARCP09486 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.29■□□□□ 0.04
SPARCP09486 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPARCP09486 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.29■□□□□ 0.04
SPARCP09486 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SPARCP09486 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SPARCP09486 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.29■□□□□ 0.04
SPARCP09486 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPARCP09486 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.29■□□□□ 0.04
SPARCP09486 MINOS1P3-201ENST00000457048 203 ntBASIC15.29■□□□□ 0.04
SPARCP09486 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.29■□□□□ 0.04
SPARCP09486 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.29■□□□□ 0.04
SPARCP09486 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.29■□□□□ 0.04
SPARCP09486 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.29■□□□□ 0.04
SPARCP09486 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.29■□□□□ 0.04
SPARCP09486 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SPARCP09486 AP005901.3-202ENST00000581653 237 ntBASIC15.29■□□□□ 0.04
SPARCP09486 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SPARCP09486 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SPARCP09486 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPARCP09486 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms