Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.99■□□□□ 0.47
ERBB2P04626 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ERBB2P04626 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
ERBB2P04626 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ERBB2P04626 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ERBB2P04626 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
ERBB2P04626 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.99■□□□□ 0.47
ERBB2P04626 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 AL031284.1-201ENST00000419297 478 ntBASIC17.99■□□□□ 0.47
ERBB2P04626 PAWRP1-201ENST00000451083 565 ntBASIC17.99■□□□□ 0.47
ERBB2P04626 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 AC105339.3-201ENST00000560043 636 ntBASIC17.99■□□□□ 0.47
ERBB2P04626 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.99■□□□□ 0.47
ERBB2P04626 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.99■□□□□ 0.47
ERBB2P04626 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERBB2P04626 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.99■□□□□ 0.47
ERBB2P04626 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ERBB2P04626 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.98■□□□□ 0.47
ERBB2P04626 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
ERBB2P04626 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.98■□□□□ 0.47
ERBB2P04626 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.98■□□□□ 0.47
ERBB2P04626 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.98■□□□□ 0.47
ERBB2P04626 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
ERBB2P04626 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.98■□□□□ 0.47
ERBB2P04626 RPS15P9-201ENST00000494093 319 ntBASIC17.98■□□□□ 0.47
ERBB2P04626 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.98■□□□□ 0.47
ERBB2P04626 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.98■□□□□ 0.47
ERBB2P04626 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ERBB2P04626 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 NKILA-202ENST00000614771 2598 ntBASIC17.98■□□□□ 0.47
ERBB2P04626 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.98■□□□□ 0.47
ERBB2P04626 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.98■□□□□ 0.47
ERBB2P04626 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERBB2P04626 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ERBB2P04626 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ERBB2P04626 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.97■□□□□ 0.47
ERBB2P04626 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.97■□□□□ 0.47
ERBB2P04626 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.97■□□□□ 0.47
ERBB2P04626 AC136632.2-201ENST00000512891 861 ntBASIC17.97■□□□□ 0.47
ERBB2P04626 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.97■□□□□ 0.47
ERBB2P04626 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.97■□□□□ 0.47
ERBB2P04626 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.97■□□□□ 0.47
ERBB2P04626 AL356488.2-201ENST00000602755 427 ntBASIC17.97■□□□□ 0.47
ERBB2P04626 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
ERBB2P04626 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ERBB2P04626 PI4KAP1-204ENST00000612579 1703 ntBASIC17.97■□□□□ 0.47
ERBB2P04626 PCDHB17P-201ENST00000539533 2393 ntBASIC17.97■□□□□ 0.47
ERBB2P04626 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ERBB2P04626 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.97■□□□□ 0.47
ERBB2P04626 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERBB2P04626 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms