Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.18■□□□□ 0.66
GGPS1O95749 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GGPS1O95749 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GGPS1O95749 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GGPS1O95749 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.18■□□□□ 0.66
GGPS1O95749 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.17■□□□□ 0.66
GGPS1O95749 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.17■□□□□ 0.66
GGPS1O95749 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
GGPS1O95749 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.17■□□□□ 0.66
GGPS1O95749 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.17■□□□□ 0.66
GGPS1O95749 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.17■□□□□ 0.66
GGPS1O95749 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.17■□□□□ 0.66
GGPS1O95749 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.17■□□□□ 0.66
GGPS1O95749 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.17■□□□□ 0.66
GGPS1O95749 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
GGPS1O95749 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.17■□□□□ 0.66
GGPS1O95749 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.17■□□□□ 0.66
GGPS1O95749 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.17■□□□□ 0.66
GGPS1O95749 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GGPS1O95749 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.16■□□□□ 0.66
GGPS1O95749 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.16■□□□□ 0.66
GGPS1O95749 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GGPS1O95749 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.16■□□□□ 0.66
GGPS1O95749 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
GGPS1O95749 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.16■□□□□ 0.66
GGPS1O95749 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 AC027612.4-201ENST00000605371 583 ntBASIC19.16■□□□□ 0.66
GGPS1O95749 AL355385.1-201ENST00000606123 409 ntBASIC19.16■□□□□ 0.66
GGPS1O95749 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.16■□□□□ 0.66
GGPS1O95749 REXO1L3P-201ENST00000622202 1288 ntBASIC19.16■□□□□ 0.66
GGPS1O95749 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.16■□□□□ 0.66
GGPS1O95749 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.16■□□□□ 0.66
GGPS1O95749 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GGPS1O95749 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GGPS1O95749 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.16■□□□□ 0.66
GGPS1O95749 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.16■□□□□ 0.66
GGPS1O95749 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GGPS1O95749 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GGPS1O95749 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GGPS1O95749 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GGPS1O95749 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.15■□□□□ 0.66
GGPS1O95749 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 AP000344.2-201ENST00000512987 629 ntBASIC19.15■□□□□ 0.66
GGPS1O95749 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.15■□□□□ 0.66
GGPS1O95749 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 AC112191.1-201ENST00000523689 701 ntBASIC19.15■□□□□ 0.66
GGPS1O95749 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.15■□□□□ 0.66
GGPS1O95749 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.15■□□□□ 0.66
GGPS1O95749 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.15■□□□□ 0.66
GGPS1O95749 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.15■□□□□ 0.66
GGPS1O95749 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GGPS1O95749 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.15■□□□□ 0.66
GGPS1O95749 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GGPS1O95749 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
GGPS1O95749 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms