Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNOT4O95628 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT4O95628 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 LINC00982-205ENST00000420957 435 ntBASIC15.26■□□□□ 0.03
CNOT4O95628 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.26■□□□□ 0.03
CNOT4O95628 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 AL138688.1-201ENST00000624851 1594 ntBASIC15.26■□□□□ 0.03
CNOT4O95628 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.26■□□□□ 0.03
CNOT4O95628 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT4O95628 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 LYSMD4-203ENST00000378904 2122 ntBASIC15.26■□□□□ 0.03
CNOT4O95628 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CNOT4O95628 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CNOT4O95628 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CNOT4O95628 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT4O95628 AL135999.2-201ENST00000622438 1686 ntBASIC15.25■□□□□ 0.03
CNOT4O95628 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CNOT4O95628 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CNOT4O95628 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CNOT4O95628 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.25■□□□□ 0.03
CNOT4O95628 AC012640.2-201ENST00000561606 901 ntBASIC15.25■□□□□ 0.03
CNOT4O95628 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.25■□□□□ 0.03
CNOT4O95628 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.25■□□□□ 0.03
CNOT4O95628 AL805961.1-202ENST00000641562 540 ntBASIC15.25■□□□□ 0.03
CNOT4O95628 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT4O95628 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CNOT4O95628 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT4O95628 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CNOT4O95628 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT4O95628 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CNOT4O95628 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.25■□□□□ 0.03
CNOT4O95628 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT4O95628 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 AP002414.1-201ENST00000391405 1147 ntBASIC15.24■□□□□ 0.03
CNOT4O95628 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT4O95628 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT4O95628 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CNOT4O95628 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.24■□□□□ 0.03
CNOT4O95628 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms