Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFPL1O75677 AL139384.1-201ENST00000612143 3047 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFPL1O75677 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFPL1O75677 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.21■□□□□ 0.35
RFPL1O75677 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFPL1O75677 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFPL1O75677 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFPL1O75677 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.21■□□□□ 0.35
RFPL1O75677 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFPL1O75677 AL022342.1-201ENST00000400363 863 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.21■□□□□ 0.35
RFPL1O75677 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.21■□□□□ 0.35
RFPL1O75677 AC005336.2-201ENST00000593183 939 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 CICP6-201ENST00000457191 2729 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 LINC02199-201ENST00000506655 2702 ntBASIC17.21■□□□□ 0.35
RFPL1O75677 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFPL1O75677 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.21■□□□□ 0.34
RFPL1O75677 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFPL1O75677 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 AL135999.2-201ENST00000622438 1686 ntBASIC17.2■□□□□ 0.34
RFPL1O75677 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.2■□□□□ 0.34
RFPL1O75677 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.2■□□□□ 0.34
RFPL1O75677 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.2■□□□□ 0.34
RFPL1O75677 AC103564.2-201ENST00000432853 1299 ntBASIC17.2■□□□□ 0.34
RFPL1O75677 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 AC079781.3-201ENST00000449110 356 ntBASIC17.2■□□□□ 0.34
RFPL1O75677 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.2■□□□□ 0.34
RFPL1O75677 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.2■□□□□ 0.34
RFPL1O75677 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.2■□□□□ 0.34
RFPL1O75677 AC104692.2-201ENST00000603054 253 ntBASIC17.2■□□□□ 0.34
RFPL1O75677 IGHV3-41-201ENST00000613121 348 ntBASIC17.2■□□□□ 0.34
RFPL1O75677 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RFPL1O75677 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFPL1O75677 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFPL1O75677 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.2■□□□□ 0.34
RFPL1O75677 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFPL1O75677 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFPL1O75677 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFPL1O75677 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.2■□□□□ 0.34
RFPL1O75677 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.19■□□□□ 0.34
RFPL1O75677 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 AC074051.2-201ENST00000565115 352 ntBASIC17.19■□□□□ 0.34
RFPL1O75677 AC138894.3-201ENST00000603787 634 ntBASIC17.19■□□□□ 0.34
RFPL1O75677 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.19■□□□□ 0.34
RFPL1O75677 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 AL391005.1-201ENST00000623953 2435 ntBASIC17.19■□□□□ 0.34
RFPL1O75677 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFPL1O75677 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RFPL1O75677 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.18■□□□□ 0.34
RFPL1O75677 AL353593.2-201ENST00000602529 1483 ntBASIC17.18■□□□□ 0.34
RFPL1O75677 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.18■□□□□ 0.34
RFPL1O75677 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms