Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PRAMEF2O60811 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 NCF1C-201ENST00000438382 1427 ntBASIC16.11■□□□□ 0.17
PRAMEF2O60811 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF2O60811 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 MIR1233-2-201ENST00000408138 82 ntBASIC16.1■□□□□ 0.17
PRAMEF2O60811 MIR1233-1-201ENST00000408722 82 ntBASIC16.1■□□□□ 0.17
PRAMEF2O60811 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 UNC93B6-202ENST00000528242 690 ntBASIC16.1■□□□□ 0.17
PRAMEF2O60811 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 AL356488.2-201ENST00000602755 427 ntBASIC16.1■□□□□ 0.17
PRAMEF2O60811 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PRAMEF2O60811 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF2O60811 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AC004817.3-201ENST00000602957 2129 ntBASIC16.09■□□□□ 0.17
PRAMEF2O60811 AC108860.2-201ENST00000562760 2183 ntBASIC16.09■□□□□ 0.17
PRAMEF2O60811 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AC005593.1-201ENST00000624894 515 ntBASIC16.09■□□□□ 0.17
PRAMEF2O60811 PGM5P2-202ENST00000637225 1043 ntBASIC16.09■□□□□ 0.17
PRAMEF2O60811 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 AC009053.2-201ENST00000563701 2365 ntBASIC16.09■□□□□ 0.17
PRAMEF2O60811 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF2O60811 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF2O60811 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms