Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
PLOD3O60568 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLOD3O60568 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PLOD3O60568 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.19■□□□□ 0.18
PLOD3O60568 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PLOD3O60568 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.19■□□□□ 0.18
PLOD3O60568 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.19■□□□□ 0.18
PLOD3O60568 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PLOD3O60568 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.19■□□□□ 0.18
PLOD3O60568 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.19■□□□□ 0.18
PLOD3O60568 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PLOD3O60568 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PLOD3O60568 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.19■□□□□ 0.18
PLOD3O60568 PRYP5-201ENST00000451909 266 ntBASIC16.19■□□□□ 0.18
PLOD3O60568 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.19■□□□□ 0.18
PLOD3O60568 KRT18P56-201ENST00000507275 550 ntBASIC16.19■□□□□ 0.18
PLOD3O60568 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.19■□□□□ 0.18
PLOD3O60568 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 AL732292.2-201ENST00000609649 430 ntBASIC16.19■□□□□ 0.18
PLOD3O60568 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.19■□□□□ 0.18
PLOD3O60568 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.19■□□□□ 0.18
PLOD3O60568 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 AC148477.5-201ENST00000625164 1645 ntBASIC16.19■□□□□ 0.18
PLOD3O60568 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 AD000864.1-201ENST00000624076 2295 ntBASIC16.19■□□□□ 0.18
PLOD3O60568 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLOD3O60568 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PLOD3O60568 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
PLOD3O60568 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.18■□□□□ 0.18
PLOD3O60568 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.18■□□□□ 0.18
PLOD3O60568 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.18■□□□□ 0.18
PLOD3O60568 LINC01711-201ENST00000598340 967 ntBASIC16.18■□□□□ 0.18
PLOD3O60568 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PLOD3O60568 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.18■□□□□ 0.18
PLOD3O60568 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.18■□□□□ 0.18
PLOD3O60568 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PLOD3O60568 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.18■□□□□ 0.18
PLOD3O60568 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLOD3O60568 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
PLOD3O60568 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PLOD3O60568 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms