Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 KRT18P1-202ENST00000452408 1331 ntBASIC16.77■□□□□ 0.28
PEX1O43933 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.77■□□□□ 0.28
PEX1O43933 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PEX1O43933 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.77■□□□□ 0.28
PEX1O43933 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.77■□□□□ 0.28
PEX1O43933 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.77■□□□□ 0.28
PEX1O43933 MIR149-201ENST00000384879 89 ntBASIC16.77■□□□□ 0.28
PEX1O43933 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PEX1O43933 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.77■□□□□ 0.28
PEX1O43933 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PEX1O43933 MIR3652-201ENST00000579335 131 ntBASIC16.77■□□□□ 0.28
PEX1O43933 MIR3180-1-201ENST00000580374 94 ntBASIC16.77■□□□□ 0.28
PEX1O43933 MIR3180-3-201ENST00000584616 94 ntBASIC16.77■□□□□ 0.28
PEX1O43933 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.77■□□□□ 0.28
PEX1O43933 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PEX1O43933 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PEX1O43933 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PEX1O43933 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PEX1O43933 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.77■□□□□ 0.27
PEX1O43933 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.77■□□□□ 0.27
PEX1O43933 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 AC016396.2-201ENST00000562575 1417 ntBASIC16.77■□□□□ 0.27
PEX1O43933 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PEX1O43933 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
PEX1O43933 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PEX1O43933 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PEX1O43933 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.76■□□□□ 0.27
PEX1O43933 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 AC116353.5-201ENST00000638148 1699 ntBASIC16.76■□□□□ 0.27
PEX1O43933 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.76■□□□□ 0.27
PEX1O43933 AC092068.3-201ENST00000587894 2016 ntBASIC16.76■□□□□ 0.27
PEX1O43933 AC005915.1-201ENST00000624912 2018 ntBASIC16.76■□□□□ 0.27
PEX1O43933 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 AL450487.1-201ENST00000426799 995 ntBASIC16.76■□□□□ 0.27
PEX1O43933 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.76■□□□□ 0.27
PEX1O43933 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.76■□□□□ 0.27
PEX1O43933 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.76■□□□□ 0.27
PEX1O43933 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.76■□□□□ 0.27
PEX1O43933 AC012313.10-201ENST00000623509 926 ntBASIC16.76■□□□□ 0.27
PEX1O43933 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.76■□□□□ 0.27
PEX1O43933 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PEX1O43933 TSPY26P-202ENST00000565928 3884 ntBASIC16.76■□□□□ 0.27
PEX1O43933 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PEX1O43933 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.76■□□□□ 0.27
PEX1O43933 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.75■□□□□ 0.27
PEX1O43933 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.75■□□□□ 0.27
PEX1O43933 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PEX1O43933 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.75■□□□□ 0.27
PEX1O43933 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.75■□□□□ 0.27
PEX1O43933 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.75■□□□□ 0.27
PEX1O43933 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.75■□□□□ 0.27
PEX1O43933 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.75■□□□□ 0.27
PEX1O43933 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PEX1O43933 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PEX1O43933 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.75■□□□□ 0.27
PEX1O43933 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms