Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
KCNQ2O43526 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNQ2O43526 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNQ2O43526 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
KCNQ2O43526 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 CHCHD2P3-201ENST00000603038 451 ntBASIC21.79■■□□□ 1.08
KCNQ2O43526 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
KCNQ2O43526 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
KCNQ2O43526 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNQ2O43526 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNQ2O43526 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNQ2O43526 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNQ2O43526 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNQ2O43526 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.78■■□□□ 1.08
KCNQ2O43526 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNQ2O43526 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNQ2O43526 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNQ2O43526 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNQ2O43526 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 AC073389.1-201ENST00000595595 795 ntBASIC21.78■■□□□ 1.08
KCNQ2O43526 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.78■■□□□ 1.08
KCNQ2O43526 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
KCNQ2O43526 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNQ2O43526 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
KCNQ2O43526 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNQ2O43526 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
KCNQ2O43526 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNQ2O43526 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNQ2O43526 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 RN7SL752P-201ENST00000463779 287 ntBASIC21.77■■□□□ 1.08
KCNQ2O43526 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNQ2O43526 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNQ2O43526 WASH4P-201ENST00000564273 1246 ntBASIC21.77■■□□□ 1.08
KCNQ2O43526 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
KCNQ2O43526 TMEM261P1-201ENST00000604899 340 ntBASIC21.77■■□□□ 1.08
KCNQ2O43526 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNQ2O43526 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
KCNQ2O43526 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNQ2O43526 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
KCNQ2O43526 LINC00304-203ENST00000565008 1864 ntBASIC21.77■■□□□ 1.08
KCNQ2O43526 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KCNQ2O43526 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
KCNQ2O43526 TOP3BP1-201ENST00000420768 1380 ntBASIC21.76■■□□□ 1.07
KCNQ2O43526 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
KCNQ2O43526 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNQ2O43526 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNQ2O43526 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
KCNQ2O43526 AC091167.2-201ENST00000579581 588 ntBASIC21.76■■□□□ 1.07
KCNQ2O43526 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNQ2O43526 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.76■■□□□ 1.07
KCNQ2O43526 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNQ2O43526 AP000974.1-201ENST00000623909 2387 ntBASIC21.76■■□□□ 1.07
KCNQ2O43526 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNQ2O43526 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNQ2O43526 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNQ2O43526 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
KCNQ2O43526 LINC00896-202ENST00000609602 2128 ntBASIC21.76■■□□□ 1.07
KCNQ2O43526 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNQ2O43526 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNQ2O43526 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms