Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCC4O15439 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ABCC4O15439 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCC4O15439 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.7■■□□□ 1.07
ABCC4O15439 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
ABCC4O15439 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.7■■□□□ 1.06
ABCC4O15439 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
ABCC4O15439 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 AC254562.1-201ENST00000417586 456 ntBASIC21.7■■□□□ 1.06
ABCC4O15439 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
ABCC4O15439 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.7■■□□□ 1.06
ABCC4O15439 SNHG9-202ENST00000564014 471 ntBASIC21.7■■□□□ 1.06
ABCC4O15439 LINC02084-201ENST00000606069 1096 ntBASIC21.7■■□□□ 1.06
ABCC4O15439 AC010507.1-201ENST00000633895 436 ntBASIC21.7■■□□□ 1.06
ABCC4O15439 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ABCC4O15439 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCC4O15439 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCC4O15439 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.69■■□□□ 1.06
ABCC4O15439 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCC4O15439 AC010654.1-201ENST00000615722 808 ntBASIC21.69■■□□□ 1.06
ABCC4O15439 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.69■■□□□ 1.06
ABCC4O15439 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCC4O15439 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCC4O15439 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCC4O15439 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.68■■□□□ 1.06
ABCC4O15439 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.68■■□□□ 1.06
ABCC4O15439 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.68■■□□□ 1.06
ABCC4O15439 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.68■■□□□ 1.06
ABCC4O15439 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.68■■□□□ 1.06
ABCC4O15439 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.68■■□□□ 1.06
ABCC4O15439 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
ABCC4O15439 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCC4O15439 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.67■■□□□ 1.06
ABCC4O15439 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ABCC4O15439 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ABCC4O15439 MKNK2P1-201ENST00000437526 628 ntBASIC21.67■■□□□ 1.06
ABCC4O15439 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.67■■□□□ 1.06
ABCC4O15439 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.67■■□□□ 1.06
ABCC4O15439 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.67■■□□□ 1.06
ABCC4O15439 OR7E47P-204ENST00000575924 449 ntBASIC21.67■■□□□ 1.06
ABCC4O15439 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.67■■□□□ 1.06
ABCC4O15439 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.67■■□□□ 1.06
ABCC4O15439 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 ELL2P1-201ENST00000413990 1906 ntBASIC21.67■■□□□ 1.06
ABCC4O15439 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.67■■□□□ 1.06
ABCC4O15439 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ABCC4O15439 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms