Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.68■□□□□ 0.1
LAMA5O15230 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 DUTP2-201ENST00000519164 463 ntBASIC15.68■□□□□ 0.1
LAMA5O15230 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 RN7SL190P-201ENST00000582519 257 ntBASIC15.68■□□□□ 0.1
LAMA5O15230 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 AC087499.5-201ENST00000452760 1342 ntBASIC15.68■□□□□ 0.1
LAMA5O15230 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.68■□□□□ 0.1
LAMA5O15230 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 AL031598.1-201ENST00000561511 1773 ntBASIC15.68■□□□□ 0.1
LAMA5O15230 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LAMA5O15230 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.68■□□□□ 0.1
LAMA5O15230 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.68■□□□□ 0.1
LAMA5O15230 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LAMA5O15230 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.68■□□□□ 0.1
LAMA5O15230 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.68■□□□□ 0.1
LAMA5O15230 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.68■□□□□ 0.1
LAMA5O15230 AC007967.4-201ENST00000614700 386 ntBASIC15.68■□□□□ 0.1
LAMA5O15230 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
LAMA5O15230 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
LAMA5O15230 BX276092.7-203ENST00000637198 1536 ntBASIC15.68■□□□□ 0.1
LAMA5O15230 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LAMA5O15230 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
LAMA5O15230 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LAMA5O15230 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.67■□□□□ 0.1
LAMA5O15230 MIR4515-201ENST00000584082 81 ntBASIC15.67■□□□□ 0.1
LAMA5O15230 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.67■□□□□ 0.1
LAMA5O15230 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.67■□□□□ 0.1
LAMA5O15230 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LAMA5O15230 AC012569.1-201ENST00000591191 1524 ntBASIC15.67■□□□□ 0.1
LAMA5O15230 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LAMA5O15230 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LAMA5O15230 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.67■□□□□ 0.1
LAMA5O15230 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LAMA5O15230 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LAMA5O15230 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
LAMA5O15230 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.67■□□□□ 0.1
LAMA5O15230 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 WASH4P-201ENST00000564273 1246 ntBASIC15.67■□□□□ 0.1
LAMA5O15230 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.67■□□□□ 0.1
LAMA5O15230 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.67■□□□□ 0.1
LAMA5O15230 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LAMA5O15230 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.66■□□□□ 0.1
LAMA5O15230 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 SPDYE19P-201ENST00000338590 713 ntBASIC15.66■□□□□ 0.1
LAMA5O15230 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LAMA5O15230 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.66■□□□□ 0.1
LAMA5O15230 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.66■□□□□ 0.1
LAMA5O15230 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 AC018665.1-201ENST00000622927 1362 ntBASIC15.66■□□□□ 0.1
LAMA5O15230 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LAMA5O15230 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.66■□□□□ 0.1
LAMA5O15230 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LAMA5O15230 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 SLC7A15P-201ENST00000424028 1363 ntBASIC15.66■□□□□ 0.1
LAMA5O15230 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
LAMA5O15230 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LAMA5O15230 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LAMA5O15230 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LAMA5O15230 AC142381.1-201ENST00000426099 345 ntBASIC15.66■□□□□ 0.1
LAMA5O15230 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.66■□□□□ 0.1
LAMA5O15230 MIR3909-201ENST00000579518 119 ntBASIC15.66■□□□□ 0.1
LAMA5O15230 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA5O15230 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.66■□□□□ 0.1
LAMA5O15230 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.66■□□□□ 0.1
LAMA5O15230 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.66■□□□□ 0.1
LAMA5O15230 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms