Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SEMA3EO15041 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.5■□□□□ 0.87
SEMA3EO15041 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.5■□□□□ 0.87
SEMA3EO15041 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.5■□□□□ 0.87
SEMA3EO15041 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SEMA3EO15041 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.5■□□□□ 0.87
SEMA3EO15041 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.5■□□□□ 0.87
SEMA3EO15041 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 AC027796.2-201ENST00000575326 344 ntBASIC20.5■□□□□ 0.87
SEMA3EO15041 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 AP001350.2-201ENST00000625104 1094 ntBASIC20.5■□□□□ 0.87
SEMA3EO15041 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SEMA3EO15041 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SEMA3EO15041 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SEMA3EO15041 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 CROCCP2-202ENST00000412962 2773 ntBASIC20.5■□□□□ 0.87
SEMA3EO15041 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEMA3EO15041 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.5■□□□□ 0.87
SEMA3EO15041 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.5■□□□□ 0.87
SEMA3EO15041 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
SEMA3EO15041 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 AC067852.2-201ENST00000590513 2313 ntBASIC20.49■□□□□ 0.87
SEMA3EO15041 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SEMA3EO15041 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3EO15041 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SEMA3EO15041 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3EO15041 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.49■□□□□ 0.87
SEMA3EO15041 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SEMA3EO15041 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3EO15041 AC092474.2-201ENST00000424288 719 ntBASIC20.49■□□□□ 0.87
SEMA3EO15041 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SEMA3EO15041 RARRES2P8-201ENST00000566335 367 ntBASIC20.49■□□□□ 0.87
SEMA3EO15041 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3EO15041 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.49■□□□□ 0.87
SEMA3EO15041 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3EO15041 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SEMA3EO15041 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA3EO15041 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA3EO15041 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SEMA3EO15041 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SEMA3EO15041 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.48■□□□□ 0.87
SEMA3EO15041 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.48■□□□□ 0.87
SEMA3EO15041 AC131009.4-201ENST00000624048 1740 ntBASIC20.48■□□□□ 0.87
SEMA3EO15041 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 RNU1-129P-201ENST00000384064 167 ntBASIC20.48■□□□□ 0.87
SEMA3EO15041 TSEN15P1-201ENST00000423257 515 ntBASIC20.48■□□□□ 0.87
SEMA3EO15041 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.48■□□□□ 0.87
SEMA3EO15041 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.48■□□□□ 0.87
SEMA3EO15041 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SEMA3EO15041 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.48■□□□□ 0.87
SEMA3EO15041 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.48■□□□□ 0.87
SEMA3EO15041 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 U1.21-201ENST00000580816 167 ntBASIC20.48■□□□□ 0.87
SEMA3EO15041 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SEMA3EO15041 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.48■□□□□ 0.87
SEMA3EO15041 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA3EO15041 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA3EO15041 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms