Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN4O14493 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 AP002414.3-201ENST00000589352 1468 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN4O14493 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN4O14493 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN4O14493 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLDN4O14493 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN4O14493 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN4O14493 PTCHD3P3-201ENST00000403073 906 ntBASIC16.15■□□□□ 0.18
CLDN4O14493 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN4O14493 RPS15P9-201ENST00000494093 319 ntBASIC16.15■□□□□ 0.18
CLDN4O14493 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN4O14493 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN4O14493 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 AL049840.3-201ENST00000602669 611 ntBASIC16.15■□□□□ 0.18
CLDN4O14493 PI4KAP1-204ENST00000612579 1703 ntBASIC16.15■□□□□ 0.18
CLDN4O14493 AF228730.7-201ENST00000641842 219 ntBASIC16.15■□□□□ 0.18
CLDN4O14493 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLDN4O14493 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 AC139713.2-201ENST00000641328 2723 ntBASIC16.15■□□□□ 0.18
CLDN4O14493 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN4O14493 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN4O14493 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLDN4O14493 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN4O14493 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN4O14493 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN4O14493 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN4O14493 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLDN4O14493 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN4O14493 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN4O14493 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN4O14493 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN4O14493 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN4O14493 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLDN4O14493 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLDN4O14493 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN4O14493 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN4O14493 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN4O14493 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN4O14493 AL590627.1-203ENST00000421194 1026 ntBASIC16.13■□□□□ 0.17
CLDN4O14493 AC098831.1-202ENST00000438821 336 ntBASIC16.13■□□□□ 0.17
CLDN4O14493 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN4O14493 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN4O14493 AC008667.4-201ENST00000607370 168 ntBASIC16.13■□□□□ 0.17
CLDN4O14493 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN4O14493 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLDN4O14493 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms