Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 RPS8P6-201ENST00000426177 609 ntBASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 KRT18P2-201ENST00000447938 1258 ntBASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 AC112482.1-201ENST00000492080 688 ntBASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 AL139327.4-201ENST00000612362 153 ntBASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 AC004790.2-201ENST00000623588 572 ntBASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPA3F8WFD2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 LINC00982-205ENST00000420957 435 ntBASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 AC004832.2-201ENST00000426397 482 ntBASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 IGHV3-65-201ENST00000523210 341 ntBASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 AC008667.4-201ENST00000607370 168 ntBASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA3F8WFD2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 LYSMD4-203ENST00000378904 2122 ntBASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 VN2R19P-201ENST00000442399 1052 ntBASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 MTDHP5-201ENST00000598980 586 ntBASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA3F8WFD2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms