Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 MIR662-201ENST00000384847 95 ntBASIC17.8■□□□□ 0.44
SRRM3A6NNA2 KRT18P67-201ENST00000432816 1264 ntBASIC17.8■□□□□ 0.44
SRRM3A6NNA2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 RNF126P1-202ENST00000569893 925 ntBASIC17.8■□□□□ 0.44
SRRM3A6NNA2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 AC079602.3-201ENST00000623931 403 ntBASIC17.8■□□□□ 0.44
SRRM3A6NNA2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 LYSMD4-203ENST00000378904 2122 ntBASIC17.79■□□□□ 0.44
SRRM3A6NNA2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 AC009065.1-201ENST00000564055 1225 ntBASIC17.79■□□□□ 0.44
SRRM3A6NNA2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 AC079781.4-201ENST00000641908 219 ntBASIC17.79■□□□□ 0.44
SRRM3A6NNA2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 AC005052.1-201ENST00000625181 2492 ntBASIC17.79■□□□□ 0.44
SRRM3A6NNA2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SRRM3A6NNA2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 AF186996.4-201ENST00000467186 377 ntBASIC17.78■□□□□ 0.44
SRRM3A6NNA2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM3A6NNA2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM3A6NNA2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms