Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 FAM86C2P-203ENST00000528684 1004 ntBASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 SPDYE9P-201ENST00000570642 692 ntBASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 STK25P1-201ENST00000585406 838 ntBASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 LINC02560-201ENST00000596379 459 ntBASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 SPDYE10P-202ENST00000612005 668 ntBASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 SPDYE8P-202ENST00000612377 668 ntBASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.47■□□□□ 0.23
TRABD2BA6NFA1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 PRORSD1P-202ENST00000563365 2154 ntBASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 AL592309.1-201ENST00000443127 649 ntBASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 KRT8P48-201ENST00000515599 1220 ntBASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRABD2BA6NFA1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRABD2BA6NFA1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRABD2BA6NFA1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.46■□□□□ 0.22
TRABD2BA6NFA1 HTR7P1-202ENST00000624664 4411 ntBASIC16.46■□□□□ 0.22
TRABD2BA6NFA1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRABD2BA6NFA1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRABD2BA6NFA1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 KLF2P3-201ENST00000451977 1087 ntBASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 DUTP2-201ENST00000519164 463 ntBASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 AC008761.3-201ENST00000624803 892 ntBASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRABD2BA6NFA1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRABD2BA6NFA1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms