Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 AC012569.1-201ENST00000591191 1524 ntBASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC187A0A096LP49 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 TERF1P3-201ENST00000505638 1227 ntBASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 UXT-AS1-201ENST00000590504 1525 ntBASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC187A0A096LP49 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 AC087641.1-201ENST00000557561 1021 ntBASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 AC140878.1-201ENST00000565277 250 ntBASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms