Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 AC078925.2-201ENST00000624013 1973 ntBASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 LINC00982-205ENST00000420957 435 ntBASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 AL118508.1-201ENST00000613502 2345 ntBASIC20.35■□□□□ 0.85
CYP46A1Q9Y6A2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 PCDHA14-201ENST00000506751 2298 ntBASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.34■□□□□ 0.85
CYP46A1Q9Y6A2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 AC106795.1-205ENST00000512851 1056 ntBASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 MIR3652-201ENST00000579335 131 ntBASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.33■□□□□ 0.85
CYP46A1Q9Y6A2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CYP46A1Q9Y6A2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms