Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 SLC25A6P2-201ENST00000497974 877 ntBASIC18.79■□□□□ 0.6
USP20Q9Y2K6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 FAM197Y3-203ENST00000618346 717 ntBASIC18.79■□□□□ 0.6
USP20Q9Y2K6 AC023511.2-201ENST00000618803 211 ntBASIC18.79■□□□□ 0.6
USP20Q9Y2K6 AC092865.6-201ENST00000642101 219 ntBASIC18.79■□□□□ 0.6
USP20Q9Y2K6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP20Q9Y2K6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 CRYGEP-201ENST00000412192 528 ntBASIC18.78■□□□□ 0.6
USP20Q9Y2K6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 HCG4B-203ENST00000450128 991 ntBASIC18.78■□□□□ 0.6
USP20Q9Y2K6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP20Q9Y2K6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 PAWRP1-201ENST00000451083 565 ntBASIC18.77■□□□□ 0.6
USP20Q9Y2K6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
USP20Q9Y2K6 AL121761.2-201ENST00000598007 1648 ntBASIC18.77■□□□□ 0.6
USP20Q9Y2K6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP20Q9Y2K6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.77■□□□□ 0.59
USP20Q9Y2K6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP20Q9Y2K6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP20Q9Y2K6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP20Q9Y2K6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP20Q9Y2K6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms