Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 SPDYE21P-201ENST00000413323 827 ntBASIC18.79■□□□□ 0.6
L1RE1Q9UN81 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.79■□□□□ 0.6
L1RE1Q9UN81 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 LINC02199-201ENST00000506655 2702 ntBASIC18.79■□□□□ 0.6
L1RE1Q9UN81 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
L1RE1Q9UN81 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 AC005104.2-201ENST00000427818 678 ntBASIC18.78■□□□□ 0.6
L1RE1Q9UN81 AF186996.4-201ENST00000467186 377 ntBASIC18.78■□□□□ 0.6
L1RE1Q9UN81 BX005266.1-201ENST00000473402 457 ntBASIC18.78■□□□□ 0.6
L1RE1Q9UN81 AC073648.2-201ENST00000510116 352 ntBASIC18.78■□□□□ 0.6
L1RE1Q9UN81 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 AC025062.2-201ENST00000605477 670 ntBASIC18.78■□□□□ 0.6
L1RE1Q9UN81 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 AL773604.1-201ENST00000617417 272 ntBASIC18.78■□□□□ 0.6
L1RE1Q9UN81 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
L1RE1Q9UN81 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 AC004817.3-201ENST00000602957 2129 ntBASIC18.77■□□□□ 0.6
L1RE1Q9UN81 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 HNRNPDP1-201ENST00000439535 754 ntBASIC18.77■□□□□ 0.6
L1RE1Q9UN81 AC002558.1-201ENST00000488906 803 ntBASIC18.77■□□□□ 0.6
L1RE1Q9UN81 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 AC064862.7-201ENST00000604520 867 ntBASIC18.77■□□□□ 0.6
L1RE1Q9UN81 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
L1RE1Q9UN81 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
L1RE1Q9UN81 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
L1RE1Q9UN81 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.77■□□□□ 0.59
L1RE1Q9UN81 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.77■□□□□ 0.59
L1RE1Q9UN81 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
L1RE1Q9UN81 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
L1RE1Q9UN81 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
L1RE1Q9UN81 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
L1RE1Q9UN81 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
L1RE1Q9UN81 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
L1RE1Q9UN81 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms