Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 RNA5SP410-201ENST00000516285 106 ntBASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 AP001258.2-201ENST00000529891 490 ntBASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 AC091167.2-201ENST00000579581 588 ntBASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 ABBA01031660.1-201ENST00000635219 756 ntBASIC26.72■■□□□ 1.87
RIMBP3Q9UFD9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 AL020996.1-203ENST00000536896 2307 ntBASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 AL162726.2-201ENST00000438986 1017 ntBASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC26.71■■□□□ 1.87
RIMBP3Q9UFD9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
RIMBP3Q9UFD9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RIMBP3Q9UFD9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC26.7■■□□□ 1.87
RIMBP3Q9UFD9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 RERG-205ENST00000537647 935 ntTSL 2 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 MAX-210ENST00000555419 765 ntTSL 5 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 AL022328.3-201ENST00000607943 679 ntBASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RIMBP3Q9UFD9 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 MIR326-201ENST00000362220 95 ntBASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 AL662890.1-201ENST00000396818 632 ntBASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 AC114501.1-201ENST00000445949 172 ntBASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 SCARNA20.5-201ENST00000516991 142 ntBASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RIMBP3Q9UFD9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RIMBP3Q9UFD9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
RIMBP3Q9UFD9 ADM-202ENST00000524948 584 ntTSL 2 BASIC26.68■■□□□ 1.86
RIMBP3Q9UFD9 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC26.68■■□□□ 1.86
RIMBP3Q9UFD9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC26.68■■□□□ 1.86
RIMBP3Q9UFD9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC26.68■■□□□ 1.86
RIMBP3Q9UFD9 AP003419.4-201ENST00000616071 517 ntBASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms