Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 AC105339.3-201ENST00000560043 636 ntBASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BLOC1S4Q9NUP1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 AL031284.1-201ENST00000419297 478 ntBASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 AC087163.2-201ENST00000457299 853 ntBASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 SLC25A6P2-201ENST00000497974 877 ntBASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 AL121894.2-201ENST00000602977 491 ntBASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 AL773604.1-201ENST00000617417 272 ntBASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 AL645728.1-201ENST00000366221 2101 ntBASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BLOC1S4Q9NUP1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 AL356488.2-201ENST00000602755 427 ntBASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 AF228730.7-201ENST00000641842 219 ntBASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 AC002310.6-201ENST00000624451 1377 ntBASIC19.02■□□□□ 0.64
BLOC1S4Q9NUP1 PI4KAP1-204ENST00000612579 1703 ntBASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
BLOC1S4Q9NUP1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 HTR7P1-202ENST00000624664 4411 ntBASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 TPM4P1-201ENST00000436100 807 ntBASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.01■□□□□ 0.63
BLOC1S4Q9NUP1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms