Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 SNORA78-201ENST00000459373 127 ntBASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 AL441883.1-201ENST00000566170 1045 ntBASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.71■□□□□ 0.75
LMBRD1Q9NUN5 AC104640.1-201ENST00000562617 2109 ntBASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 AC122714.2-201ENST00000502787 707 ntBASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 AP002490.2-201ENST00000524791 560 ntBASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 KRT17P2-201ENST00000300992 1314 ntBASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LMBRD1Q9NUN5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 MMP23A-201ENST00000234610 1017 ntBASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 MIR718-201ENST00000390190 70 ntBASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 DUX4L17-201ENST00000557360 1267 ntBASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LMBRD1Q9NUN5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LMBRD1Q9NUN5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms