Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.56■□□□□ 0.88
SALL1Q9NSC2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 DUX4L17-201ENST00000557360 1267 ntBASIC20.55■□□□□ 0.88
SALL1Q9NSC2 AC027796.2-201ENST00000575326 344 ntBASIC20.55■□□□□ 0.88
SALL1Q9NSC2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 AC093525.9-201ENST00000624961 1746 ntBASIC20.55■□□□□ 0.88
SALL1Q9NSC2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 AC080080.1-201ENST00000625121 2420 ntBASIC20.55■□□□□ 0.88
SALL1Q9NSC2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SALL1Q9NSC2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL1Q9NSC2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 AP001094.4-201ENST00000579008 2176 ntBASIC20.53■□□□□ 0.88
SALL1Q9NSC2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 HMGA1P7-201ENST00000406908 502 ntBASIC20.53■□□□□ 0.88
SALL1Q9NSC2 AC004461.1-201ENST00000412461 403 ntBASIC20.53■□□□□ 0.88
SALL1Q9NSC2 AL355306.1-201ENST00000415580 579 ntBASIC20.53■□□□□ 0.88
SALL1Q9NSC2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 AC022145.2-201ENST00000598203 171 ntBASIC20.53■□□□□ 0.88
SALL1Q9NSC2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.53■□□□□ 0.88
SALL1Q9NSC2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.52■□□□□ 0.88
SALL1Q9NSC2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SALL1Q9NSC2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.52■□□□□ 0.88
SALL1Q9NSC2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SALL1Q9NSC2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SALL1Q9NSC2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.52■□□□□ 0.87
SALL1Q9NSC2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
SALL1Q9NSC2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms