Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD8Q9HCK8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 KRT18P34-201ENST00000488218 1270 ntBASIC15.71■□□□□ 0.11
CHD8Q9HCK8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHD8Q9HCK8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AC023310.3-201ENST00000557027 670 ntBASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AC100756.1-201ENST00000562736 682 ntBASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AC138749.3-201ENST00000567691 622 ntBASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AC025048.3-201ENST00000590609 569 ntBASIC15.71■□□□□ 0.1
CHD8Q9HCK8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 AC116165.1-201ENST00000611806 668 ntBASIC15.71■□□□□ 0.1
CHD8Q9HCK8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.71■□□□□ 0.1
CHD8Q9HCK8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 MEP1AP4-201ENST00000423244 1087 ntBASIC15.7■□□□□ 0.1
CHD8Q9HCK8 PFN1P12-201ENST00000455938 534 ntBASIC15.7■□□□□ 0.1
CHD8Q9HCK8 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 MIR7845-201ENST00000618396 99 ntBASIC15.7■□□□□ 0.1
CHD8Q9HCK8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 HLA-H-201ENST00000383620 1096 ntBASIC15.7■□□□□ 0.1
CHD8Q9HCK8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 AC114501.2-201ENST00000439631 535 ntBASIC15.7■□□□□ 0.1
CHD8Q9HCK8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHD8Q9HCK8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 AC126763.1-201ENST00000552015 2118 ntBASIC15.69■□□□□ 0.1
CHD8Q9HCK8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 RPL17P11-201ENST00000417593 544 ntBASIC15.69■□□□□ 0.1
CHD8Q9HCK8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 AC093726.1-201ENST00000608064 963 ntBASIC15.69■□□□□ 0.1
CHD8Q9HCK8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 RN7SL769P-201ENST00000469386 295 ntBASIC15.69■□□□□ 0.1
CHD8Q9HCK8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.69■□□□□ 0.1
CHD8Q9HCK8 LINC00896-202ENST00000609602 2128 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms