Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 INTS4P1-201ENST00000438455 1935 ntBASIC16.53■□□□□ 0.24
LRTM1Q9HBL6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 NSUN5P1-202ENST00000421140 1535 ntBASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 NSUN5P2-203ENST00000457352 1529 ntBASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 PCED1CP-201ENST00000419887 785 ntBASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 AP002383.4-201ENST00000442518 975 ntBASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 TOB2P1-201ENST00000469761 992 ntBASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 AP002414.4-201ENST00000589764 1148 ntBASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 BNIP3P18-201ENST00000593976 575 ntBASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRTM1Q9HBL6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRTM1Q9HBL6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 LINC00265-3P-201ENST00000447588 903 ntBASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 PCDHB19P-201ENST00000570871 2371 ntBASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 IER3-202ENST00000376377 1350 ntBASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
LRTM1Q9HBL6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 RCN1P2-201ENST00000398357 915 ntBASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LRTM1Q9HBL6 AC087388.1-201ENST00000571370 1112 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms