Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CIPCQ9C0C6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 AC092183.1-201ENST00000469884 875 ntBASIC17.54■□□□□ 0.4
CIPCQ9C0C6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 AC096734.2-201ENST00000562054 433 ntBASIC17.54■□□□□ 0.4
CIPCQ9C0C6 AC004877.2-201ENST00000623941 599 ntBASIC17.54■□□□□ 0.4
CIPCQ9C0C6 AC134684.3-201ENST00000641758 218 ntBASIC17.54■□□□□ 0.4
CIPCQ9C0C6 AC079781.4-201ENST00000641908 219 ntBASIC17.54■□□□□ 0.4
CIPCQ9C0C6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.54■□□□□ 0.4
CIPCQ9C0C6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 AC133963.1-201ENST00000504166 1679 ntBASIC17.53■□□□□ 0.4
CIPCQ9C0C6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 AC005829.1-201ENST00000570002 483 ntBASIC17.53■□□□□ 0.4
CIPCQ9C0C6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CIPCQ9C0C6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 AC211486.1-202ENST00000416371 468 ntBASIC17.52■□□□□ 0.4
CIPCQ9C0C6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 AC211476.1-201ENST00000503899 468 ntBASIC17.52■□□□□ 0.4
CIPCQ9C0C6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.52■□□□□ 0.4
CIPCQ9C0C6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CIPCQ9C0C6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms