Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 AC079781.3-201ENST00000449110 356 ntBASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 EGFEM1P-202ENST00000431685 1563 ntBASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXP3Q9BZS1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AC233702.3-201ENST00000578656 1387 ntBASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AC099336.1-202ENST00000602961 463 ntBASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXP3Q9BZS1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXP3Q9BZS1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms