Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SLC9A3P2-201ENST00000447821 2021 ntBASIC22.46■■□□□ 1.19
ABCA3Q99758 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ABCA3Q99758 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ABCA3Q99758 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ABCA3Q99758 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
ABCA3Q99758 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.46■■□□□ 1.19
ABCA3Q99758 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
ABCA3Q99758 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
ABCA3Q99758 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
ABCA3Q99758 FAM86MP-201ENST00000340703 885 ntBASIC22.45■■□□□ 1.19
ABCA3Q99758 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
ABCA3Q99758 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC22.45■■□□□ 1.19
ABCA3Q99758 RNA5SP410-201ENST00000516285 106 ntBASIC22.45■■□□□ 1.19
ABCA3Q99758 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC22.45■■□□□ 1.19
ABCA3Q99758 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
ABCA3Q99758 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ABCA3Q99758 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.45■■□□□ 1.18
ABCA3Q99758 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCA3Q99758 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCA3Q99758 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC22.45■■□□□ 1.18
ABCA3Q99758 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 AC073439.1-201ENST00000624121 1774 ntBASIC22.45■■□□□ 1.18
ABCA3Q99758 SPDYE19P-201ENST00000338590 713 ntBASIC22.45■■□□□ 1.18
ABCA3Q99758 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCA3Q99758 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC22.45■■□□□ 1.18
ABCA3Q99758 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC22.45■■□□□ 1.18
ABCA3Q99758 KRT223P-202ENST00000449164 1292 ntBASIC22.45■■□□□ 1.18
ABCA3Q99758 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC22.45■■□□□ 1.18
ABCA3Q99758 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCA3Q99758 RAB43P1-201ENST00000561790 589 ntBASIC22.45■■□□□ 1.18
ABCA3Q99758 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCA3Q99758 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCA3Q99758 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ABCA3Q99758 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.45■■□□□ 1.18
ABCA3Q99758 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.45■■□□□ 1.18
ABCA3Q99758 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ABCA3Q99758 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.44■■□□□ 1.18
ABCA3Q99758 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.44■■□□□ 1.18
ABCA3Q99758 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.44■■□□□ 1.18
ABCA3Q99758 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
ABCA3Q99758 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC22.44■■□□□ 1.18
ABCA3Q99758 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC22.44■■□□□ 1.18
ABCA3Q99758 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 GLI4-203ENST00000517468 963 ntTSL 5 BASIC22.44■■□□□ 1.18
ABCA3Q99758 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.44■■□□□ 1.18
ABCA3Q99758 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC22.44■■□□□ 1.18
ABCA3Q99758 SNX12-206ENST00000622259 661 ntTSL 5 BASIC22.44■■□□□ 1.18
ABCA3Q99758 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC22.44■■□□□ 1.18
ABCA3Q99758 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 STX3-203ENST00000529177 1571 ntTSL 2 BASIC22.44■■□□□ 1.18
ABCA3Q99758 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
ABCA3Q99758 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ABCA3Q99758 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.44■■□□□ 1.18
ABCA3Q99758 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
ABCA3Q99758 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
ABCA3Q99758 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.43■■□□□ 1.18
ABCA3Q99758 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.43■■□□□ 1.18
ABCA3Q99758 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
ABCA3Q99758 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.43■■□□□ 1.18
ABCA3Q99758 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.43■■□□□ 1.18
ABCA3Q99758 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ABCA3Q99758 USP32P1-208ENST00000506594 1164 ntBASIC22.43■■□□□ 1.18
ABCA3Q99758 ORC6-206ENST00000568364 888 ntTSL 5 BASIC22.43■■□□□ 1.18
ABCA3Q99758 MIR4259-201ENST00000584466 101 ntBASIC22.43■■□□□ 1.18
ABCA3Q99758 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.43■■□□□ 1.18
ABCA3Q99758 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.42■■□□□ 1.18
ABCA3Q99758 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.42■■□□□ 1.18
ABCA3Q99758 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ABCA3Q99758 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ABCA3Q99758 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
ABCA3Q99758 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC22.42■■□□□ 1.18
ABCA3Q99758 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms