Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS1Q99742 AC093525.9-201ENST00000624961 1746 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS1Q99742 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS1Q99742 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS1Q99742 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS1Q99742 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS1Q99742 AC026396.1-201ENST00000419388 421 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS1Q99742 OR7E14P-202ENST00000530490 1290 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS1Q99742 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.66■□□□□ 0.1
NPAS1Q99742 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS1Q99742 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS1Q99742 FAM215A-202ENST00000632077 792 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NPAS1Q99742 AC107918.4-202ENST00000641623 219 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
NPAS1Q99742 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS1Q99742 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS1Q99742 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NPAS1Q99742 AC016396.2-201ENST00000562575 1417 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS1Q99742 AC092053.1-201ENST00000605787 1936 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NPAS1Q99742 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS1Q99742 AP001094.4-201ENST00000579008 2176 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 AC006504.4-201ENST00000592118 1568 ntBASIC15.66■□□□□ 0.1
NPAS1Q99742 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NPAS1Q99742 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NPAS1Q99742 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS1Q99742 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS1Q99742 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
NPAS1Q99742 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 AP002414.3-201ENST00000589352 1468 ntBASIC15.65■□□□□ 0.1
NPAS1Q99742 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NPAS1Q99742 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS1Q99742 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS1Q99742 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS1Q99742 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS1Q99742 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.65■□□□□ 0.1
NPAS1Q99742 AF186996.4-201ENST00000467186 377 ntBASIC15.65■□□□□ 0.1
NPAS1Q99742 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.65■□□□□ 0.1
NPAS1Q99742 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.65■□□□□ 0.1
NPAS1Q99742 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.65■□□□□ 0.1
NPAS1Q99742 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS1Q99742 AL353135.1-201ENST00000606729 504 ntBASIC15.65■□□□□ 0.1
NPAS1Q99742 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS1Q99742 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS1Q99742 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NPAS1Q99742 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS1Q99742 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS1Q99742 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
NPAS1Q99742 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NPAS1Q99742 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPAS1Q99742 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS1Q99742 ELK2BP-201ENST00000415014 1224 ntBASIC15.64■□□□□ 0.09
NPAS1Q99742 AL031284.1-201ENST00000419297 478 ntBASIC15.64■□□□□ 0.09
NPAS1Q99742 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS1Q99742 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS1Q99742 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS1Q99742 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS1Q99742 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS1Q99742 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS1Q99742 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.64■□□□□ 0.09
NPAS1Q99742 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms