Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL13Q99616 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL13Q99616 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL13Q99616 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CCL13Q99616 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL13Q99616 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL13Q99616 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CCL13Q99616 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL13Q99616 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL13Q99616 SLC25A1P3-201ENST00000395415 828 ntBASIC14.38□□□□□ -0.11
CCL13Q99616 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 AC093909.1-201ENST00000504731 1122 ntBASIC14.38□□□□□ -0.11
CCL13Q99616 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL13Q99616 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.38□□□□□ -0.11
CCL13Q99616 AC105339.3-201ENST00000560043 636 ntBASIC14.38□□□□□ -0.11
CCL13Q99616 AC012640.2-201ENST00000561606 901 ntBASIC14.38□□□□□ -0.11
CCL13Q99616 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCL13Q99616 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CCL13Q99616 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CCL13Q99616 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.38□□□□□ -0.11
CCL13Q99616 AC008735.5-201ENST00000623544 497 ntBASIC14.38□□□□□ -0.11
CCL13Q99616 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CCL13Q99616 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCL13Q99616 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 AC006504.4-201ENST00000592118 1568 ntBASIC14.38□□□□□ -0.11
CCL13Q99616 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL13Q99616 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL13Q99616 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL13Q99616 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL13Q99616 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL13Q99616 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL13Q99616 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL13Q99616 ELK2BP-201ENST00000415014 1224 ntBASIC14.37□□□□□ -0.11
CCL13Q99616 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL13Q99616 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL13Q99616 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL13Q99616 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL13Q99616 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL13Q99616 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL13Q99616 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL13Q99616 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL13Q99616 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.37□□□□□ -0.11
CCL13Q99616 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCL13Q99616 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL13Q99616 EGFEM1P-202ENST00000431685 1563 ntBASIC14.37□□□□□ -0.11
CCL13Q99616 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL13Q99616 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL13Q99616 HLA-A-201ENST00000376802 1334 ntBASIC14.37□□□□□ -0.11
CCL13Q99616 AL590787.1-201ENST00000568856 1315 ntBASIC14.37□□□□□ -0.11
CCL13Q99616 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCL13Q99616 AP002414.3-201ENST00000589352 1468 ntBASIC14.37□□□□□ -0.11
CCL13Q99616 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL13Q99616 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL13Q99616 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL13Q99616 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CCL13Q99616 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL13Q99616 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms