Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 AC005237.2-201ENST00000434368 219 ntBASIC15.29■□□□□ 0.04
SPENQ96T58 AC119751.2-201ENST00000504529 210 ntBASIC15.29■□□□□ 0.04
SPENQ96T58 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
SPENQ96T58 MIR4453-201ENST00000584019 89 ntBASIC15.29■□□□□ 0.04
SPENQ96T58 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.29■□□□□ 0.04
SPENQ96T58 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.29■□□□□ 0.04
SPENQ96T58 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.29■□□□□ 0.04
SPENQ96T58 AC067852.2-201ENST00000590513 2313 ntBASIC15.29■□□□□ 0.04
SPENQ96T58 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.29■□□□□ 0.04
SPENQ96T58 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.29■□□□□ 0.04
SPENQ96T58 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.29■□□□□ 0.04
SPENQ96T58 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SPENQ96T58 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.29■□□□□ 0.04
SPENQ96T58 ACA64.2-201ENST00000459014 129 ntBASIC15.29■□□□□ 0.04
SPENQ96T58 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SPENQ96T58 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SPENQ96T58 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
SPENQ96T58 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.29■□□□□ 0.04
SPENQ96T58 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.29■□□□□ 0.04
SPENQ96T58 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.29■□□□□ 0.04
SPENQ96T58 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.29■□□□□ 0.04
SPENQ96T58 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SPENQ96T58 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.28■□□□□ 0.04
SPENQ96T58 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.28■□□□□ 0.04
SPENQ96T58 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.28■□□□□ 0.04
SPENQ96T58 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.28■□□□□ 0.04
SPENQ96T58 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
SPENQ96T58 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SPENQ96T58 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.28■□□□□ 0.04
SPENQ96T58 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.28■□□□□ 0.04
SPENQ96T58 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SPENQ96T58 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 MIR3909-201ENST00000579518 119 ntBASIC15.28■□□□□ 0.04
SPENQ96T58 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
SPENQ96T58 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SPENQ96T58 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SPENQ96T58 AC138028.4-201ENST00000564984 1845 ntBASIC15.27■□□□□ 0.04
SPENQ96T58 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPENQ96T58 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SPENQ96T58 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SPENQ96T58 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPENQ96T58 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.27■□□□□ 0.04
SPENQ96T58 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPENQ96T58 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.27■□□□□ 0.04
SPENQ96T58 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.27■□□□□ 0.04
SPENQ96T58 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.27■□□□□ 0.04
SPENQ96T58 AC027307.3-201ENST00000594262 1100 ntBASIC15.27■□□□□ 0.04
SPENQ96T58 AC004840.1-201ENST00000636359 365 ntBASIC15.27■□□□□ 0.04
SPENQ96T58 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.27■□□□□ 0.04
SPENQ96T58 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.27■□□□□ 0.04
SPENQ96T58 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPENQ96T58 AL133373.2-201ENST00000623187 2828 ntBASIC15.27■□□□□ 0.04
SPENQ96T58 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPENQ96T58 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.27■□□□□ 0.03
SPENQ96T58 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPENQ96T58 MIR6799-201ENST00000620297 69 ntBASIC15.27■□□□□ 0.03
SPENQ96T58 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SPENQ96T58 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPENQ96T58 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPENQ96T58 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.27■□□□□ 0.03
SPENQ96T58 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPENQ96T58 AL671277.1-201ENST00000429656 993 ntBASIC15.27■□□□□ 0.03
SPENQ96T58 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.27■□□□□ 0.03
SPENQ96T58 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.27■□□□□ 0.03
SPENQ96T58 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.27■□□□□ 0.03
SPENQ96T58 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SPENQ96T58 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPENQ96T58 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPENQ96T58 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPENQ96T58 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPENQ96T58 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SPENQ96T58 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPENQ96T58 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms