Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BBS4Q96RK4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 AC022211.2-201ENST00000585075 2527 ntBASIC16.3■□□□□ 0.2
BBS4Q96RK4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BBS4Q96RK4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.3■□□□□ 0.2
BBS4Q96RK4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 SPDYE21P-201ENST00000413323 827 ntBASIC16.29■□□□□ 0.2
BBS4Q96RK4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 AC132008.2-207ENST00000454517 770 ntBASIC16.29■□□□□ 0.2
BBS4Q96RK4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 AC060834.1-201ENST00000443027 2032 ntBASIC16.29■□□□□ 0.2
BBS4Q96RK4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BBS4Q96RK4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.29■□□□□ 0.2
BBS4Q96RK4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 NUS1P1-201ENST00000446295 882 ntBASIC16.28■□□□□ 0.2
BBS4Q96RK4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 AL121772.3-201ENST00000610840 674 ntBASIC16.28■□□□□ 0.2
BBS4Q96RK4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.28■□□□□ 0.2
BBS4Q96RK4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BBS4Q96RK4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms