Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 AGGF1P2-201ENST00000426656 2106 ntBASIC20.3■□□□□ 0.84
NEK1Q96PY6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NEK1Q96PY6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
NEK1Q96PY6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 AP002414.1-201ENST00000391405 1147 ntBASIC20.29■□□□□ 0.84
NEK1Q96PY6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 EMBP1-201ENST00000458200 901 ntBASIC20.29■□□□□ 0.84
NEK1Q96PY6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NEK1Q96PY6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
NEK1Q96PY6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.28■□□□□ 0.84
NEK1Q96PY6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 AC004706.3-202ENST00000621574 984 ntBASIC20.28■□□□□ 0.84
NEK1Q96PY6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NEK1Q96PY6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEK1Q96PY6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 DUX4L17-201ENST00000557360 1267 ntBASIC20.27■□□□□ 0.84
NEK1Q96PY6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.27■□□□□ 0.84
NEK1Q96PY6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK1Q96PY6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.27■□□□□ 0.84
NEK1Q96PY6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NEK1Q96PY6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
NEK1Q96PY6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.27■□□□□ 0.83
NEK1Q96PY6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NEK1Q96PY6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NEK1Q96PY6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms