Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 AL645728.2-201ENST00000641974 660 ntBASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGAP1Q96PV0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 AL355306.1-201ENST00000415580 579 ntBASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 AC140658.5-201ENST00000438532 169 ntBASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 AC109322.1-201ENST00000524499 1264 ntBASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 AC093512.1-201ENST00000617969 520 ntBASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 AL355312.1-201ENST00000407115 2176 ntBASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGAP1Q96PV0 GNAS-203ENST00000306120 1878 ntBASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms