Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AC023824.1-201ENST00000562945 2975 ntBASIC13.04□□□□□ -0.32
AP1S3Q96PC3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AC090192.1-201ENST00000517740 490 ntBASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 MIR4674-201ENST00000582457 87 ntBASIC13.04□□□□□ -0.32
AP1S3Q96PC3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 CD177P1-201ENST00000606252 935 ntBASIC13.04□□□□□ -0.32
AP1S3Q96PC3 AC116407.2-201ENST00000613639 860 ntBASIC13.04□□□□□ -0.32
AP1S3Q96PC3 FAM197Y4-202ENST00000622692 608 ntBASIC13.04□□□□□ -0.32
AP1S3Q96PC3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP1S3Q96PC3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.03□□□□□ -0.32
AP1S3Q96PC3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 AC128676.1-201ENST00000454392 318 ntBASIC13.03□□□□□ -0.32
AP1S3Q96PC3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.03□□□□□ -0.32
AP1S3Q96PC3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
AP1S3Q96PC3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms