Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 INE1-201ENST00000456273 945 ntBASIC19.85■□□□□ 0.77
CDCA5Q96FF9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 TEX28P1-201ENST00000613479 1221 ntBASIC19.85■□□□□ 0.77
CDCA5Q96FF9 TEX28P2-201ENST00000617764 1221 ntBASIC19.85■□□□□ 0.77
CDCA5Q96FF9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA5Q96FF9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.84■□□□□ 0.77
CDCA5Q96FF9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AC087499.5-201ENST00000452760 1342 ntBASIC19.84■□□□□ 0.77
CDCA5Q96FF9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AC073389.1-201ENST00000595595 795 ntBASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AC017083.2-201ENST00000608069 979 ntBASIC19.84■□□□□ 0.77
CDCA5Q96FF9 AC004840.1-201ENST00000636359 365 ntBASIC19.84■□□□□ 0.77
CDCA5Q96FF9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA5Q96FF9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 DGCR5-201ENST00000399539 862 ntBASIC19.83■□□□□ 0.77
CDCA5Q96FF9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.83■□□□□ 0.77
CDCA5Q96FF9 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.83■□□□□ 0.77
CDCA5Q96FF9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.83■□□□□ 0.77
CDCA5Q96FF9 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.83■□□□□ 0.77
CDCA5Q96FF9 AP001350.2-201ENST00000625104 1094 ntBASIC19.83■□□□□ 0.77
CDCA5Q96FF9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA5Q96FF9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA5Q96FF9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA5Q96FF9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA5Q96FF9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.82■□□□□ 0.76
CDCA5Q96FF9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDCA5Q96FF9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDCA5Q96FF9 LINC00304-203ENST00000565008 1864 ntBASIC19.82■□□□□ 0.76
CDCA5Q96FF9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDCA5Q96FF9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms