Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 HMGA1P7-201ENST00000406908 502 ntBASIC15.4■□□□□ 0.06
RNF138Q8WVD3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 AC004832.2-201ENST00000426397 482 ntBASIC15.4■□□□□ 0.06
RNF138Q8WVD3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 AC087641.1-201ENST00000557561 1021 ntBASIC15.4■□□□□ 0.06
RNF138Q8WVD3 AL031432.2-201ENST00000566714 459 ntBASIC15.4■□□□□ 0.06
RNF138Q8WVD3 AL928711.1-201ENST00000570165 459 ntBASIC15.4■□□□□ 0.06
RNF138Q8WVD3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 PMS2P7-201ENST00000506558 1336 ntBASIC15.4■□□□□ 0.06
RNF138Q8WVD3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 AL645728.1-201ENST00000366221 2101 ntBASIC15.4■□□□□ 0.06
RNF138Q8WVD3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 AL513480.1-201ENST00000451731 511 ntBASIC15.39■□□□□ 0.05
RNF138Q8WVD3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 MIR3909-201ENST00000579518 119 ntBASIC15.39■□□□□ 0.05
RNF138Q8WVD3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.39■□□□□ 0.05
RNF138Q8WVD3 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.39■□□□□ 0.05
RNF138Q8WVD3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 AL513190.1-201ENST00000621254 727 ntBASIC15.39■□□□□ 0.05
RNF138Q8WVD3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 AC092865.6-201ENST00000642101 219 ntBASIC15.39■□□□□ 0.05
RNF138Q8WVD3 AC025580.3-201ENST00000617932 1424 ntBASIC15.39■□□□□ 0.05
RNF138Q8WVD3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF138Q8WVD3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 AC012569.1-201ENST00000591191 1524 ntBASIC15.38■□□□□ 0.05
RNF138Q8WVD3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 MCCD1P2-201ENST00000423228 335 ntBASIC15.38■□□□□ 0.05
RNF138Q8WVD3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 AC020763.4-201ENST00000623414 4170 ntBASIC15.38■□□□□ 0.05
RNF138Q8WVD3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF138Q8WVD3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms