Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 AC026740.1-201ENST00000607068 791 ntBASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 AC006538.1-201ENST00000567905 1585 ntBASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 AC116562.4-201ENST00000641316 2276 ntBASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 AC093525.8-201ENST00000624099 1342 ntBASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 AC104581.1-202ENST00000635932 2618 ntBASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRUNE2Q8WUY3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 AC142381.1-201ENST00000426099 345 ntBASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 AC093004.1-201ENST00000508850 424 ntBASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 BANF1P1-201ENST00000553684 263 ntBASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.66■□□□□ 0.42
PRUNE2Q8WUY3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 RNA5SP412-201ENST00000516234 123 ntBASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 REXO1L9P-201ENST00000604264 2108 ntBASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRUNE2Q8WUY3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PRUNE2Q8WUY3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PRUNE2Q8WUY3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.42
PRUNE2Q8WUY3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 GPAA1P2-201ENST00000417923 928 ntBASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRUNE2Q8WUY3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms