Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 AC068418.2-201ENST00000577309 3703 ntBASIC17.17■□□□□ 0.34
RAB3IL1Q8TBN0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 AL513523.2-202ENST00000427283 2040 ntBASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 AC022188.1-201ENST00000620960 1664 ntBASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 AC097374.2-201ENST00000618617 1306 ntBASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB3IL1Q8TBN0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 INGX-201ENST00000359239 846 ntBASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 HMGA1P5-201ENST00000412453 271 ntBASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 AL365209.1-201ENST00000624418 6473 ntBASIC17.15■□□□□ 0.34
RAB3IL1Q8TBN0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.14■□□□□ 0.34
RAB3IL1Q8TBN0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 COX5BP2-201ENST00000392354 334 ntBASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RAB3IL1Q8TBN0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms