Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 AL356488.2-201ENST00000602755 427 ntBASIC18.17■□□□□ 0.5
UBA3Q8TBC4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.16■□□□□ 0.5
UBA3Q8TBC4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 AC093909.1-201ENST00000504731 1122 ntBASIC18.16■□□□□ 0.5
UBA3Q8TBC4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 AC136632.2-201ENST00000512891 861 ntBASIC18.16■□□□□ 0.5
UBA3Q8TBC4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBA3Q8TBC4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 RPS15P9-201ENST00000494093 319 ntBASIC18.15■□□□□ 0.5
UBA3Q8TBC4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 MIR1199-201ENST00000621445 119 ntBASIC18.15■□□□□ 0.5
UBA3Q8TBC4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 AC092068.3-201ENST00000587894 2016 ntBASIC18.15■□□□□ 0.5
UBA3Q8TBC4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBA3Q8TBC4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBA3Q8TBC4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.14■□□□□ 0.5
UBA3Q8TBC4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 FRMD8P1-201ENST00000440433 1524 ntBASIC18.14■□□□□ 0.49
UBA3Q8TBC4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.14■□□□□ 0.49
UBA3Q8TBC4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms