Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 AC136632.2-201ENST00000512891 861 ntBASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 AP001005.1-201ENST00000571755 1248 ntBASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 MIR7706-201ENST00000613747 67 ntBASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC148Q8NFR7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AC006504.4-201ENST00000592118 1568 ntBASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AC073621.1-201ENST00000392730 636 ntBASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AC093909.1-201ENST00000504731 1122 ntBASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AC124947.2-201ENST00000547118 1133 ntBASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AL805961.1-202ENST00000641562 540 ntBASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC148Q8NFR7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 PGM5P2-202ENST00000637225 1043 ntBASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 AC106820.2-201ENST00000563775 3264 ntBASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC148Q8NFR7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC148Q8NFR7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms