Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 AC092068.3-201ENST00000587894 2016 ntBASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 AL590787.1-201ENST00000568856 1315 ntBASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM35BQ8NCS4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 AL139424.1-201ENST00000607572 797 ntBASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM35BQ8NCS4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 AC021087.4-201ENST00000563761 564 ntBASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 AC009053.2-201ENST00000563701 2365 ntBASIC18.16■□□□□ 0.5
TMEM35BQ8NCS4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 AC025062.2-201ENST00000605477 670 ntBASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 AC105020.1-201ENST00000435356 2205 ntBASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM35BQ8NCS4 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms