Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 LAGE3P1-201ENST00000425356 484 ntBASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 MIR7706-201ENST00000613747 67 ntBASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC82Q8N4S0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC82Q8N4S0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC82Q8N4S0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 AC092910.1-201ENST00000482027 1129 ntBASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 AP001005.1-201ENST00000571755 1248 ntBASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 AL139424.1-201ENST00000607572 797 ntBASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 AL590787.1-201ENST00000568856 1315 ntBASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC82Q8N4S0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 AC022211.2-201ENST00000585075 2527 ntBASIC20■□□□□ 0.79
CCDC82Q8N4S0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 ELK2BP-201ENST00000415014 1224 ntBASIC20■□□□□ 0.79
CCDC82Q8N4S0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 AL662844.1-201ENST00000546340 181 ntBASIC20■□□□□ 0.79
CCDC82Q8N4S0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 AC008735.5-201ENST00000623544 497 ntBASIC20■□□□□ 0.79
CCDC82Q8N4S0 AC116407.3-201ENST00000623905 1129 ntBASIC20■□□□□ 0.79
CCDC82Q8N4S0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC82Q8N4S0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20■□□□□ 0.79
CCDC82Q8N4S0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 AC060834.1-201ENST00000443027 2032 ntBASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 RPS2P28-201ENST00000314255 741 ntBASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC82Q8N4S0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms