Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 HLA-J-202ENST00000469281 1241 ntBASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 AL138831.2-201ENST00000606564 490 ntBASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 AC022188.1-201ENST00000620960 1664 ntBASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 HYMAI-201ENST00000635591 3347 ntBASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01561Q8N1V8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AC026691.1-201ENST00000602502 2017 ntBASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01561Q8N1V8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms