Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 HTR5BP-201ENST00000430851 1154 ntBASIC18.63■□□□□ 0.57
VPS52Q8N1B4 METTL21AP1-201ENST00000438852 635 ntBASIC18.63■□□□□ 0.57
VPS52Q8N1B4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 GPR89P-201ENST00000407924 1495 ntBASIC18.63■□□□□ 0.57
VPS52Q8N1B4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VPS52Q8N1B4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 PRORSD1P-202ENST00000563365 2154 ntBASIC18.62■□□□□ 0.57
VPS52Q8N1B4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 MRPL20P1-201ENST00000400819 433 ntBASIC18.62■□□□□ 0.57
VPS52Q8N1B4 PTCHD3P3-201ENST00000403073 906 ntBASIC18.62■□□□□ 0.57
VPS52Q8N1B4 DDX43P3-201ENST00000441064 443 ntBASIC18.62■□□□□ 0.57
VPS52Q8N1B4 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 AL078644.1-201ENST00000609881 752 ntBASIC18.62■□□□□ 0.57
VPS52Q8N1B4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 AC010654.1-201ENST00000615722 808 ntBASIC18.62■□□□□ 0.57
VPS52Q8N1B4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VPS52Q8N1B4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC009336.1-201ENST00000608941 1553 ntBASIC18.61■□□□□ 0.57
VPS52Q8N1B4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS52Q8N1B4 IGLL3P-201ENST00000412472 434 ntBASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC254562.1-201ENST00000417586 456 ntBASIC18.61■□□□□ 0.57
VPS52Q8N1B4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms